Publications

Biochar is a widely recognized soil amendment used to improve soil physicochemical properties and crop productivity. However, its compositive effects on soil water, fertilizer, and carbon in cropping systems are not extensively understood. A two-year field study was conducted to investigate the influence of integrating maize-residue-derived biochar on evapotranspiration, water and fertilizer utilization efficiency, soil organic carbon (SOC) content, and soil carbon emissions in maize farming, employing drip irrigation in conjunction with film mulching. The treatments included the following three biochar amendments: 15 (B15); 30 (B30); and 45 (B45) t ha−1. Biochar was exclusively incorporated prior to sowing during the initial year of the experiment, and no biochar was used as a control (CK). After two years, the biochar amendments, especially B30, improved crop water productivity and the partial factor productivities of nitrogen, phosphorus, and potassium fertilizer. Relative to CK, the biochar amendments significantly reduced soil CO2 and CH4 emissions during crop growth by 17.6–40.6% and −1.21–268.4%, respectively, averaged across two years. The best treatment effect was achieved by adding 15 t ha−1 of biochar. The biochar needed replenishing in the third year for B30 and in the fourth year for B45 to increase the SOC content by 20 g kg−1. An application rate of 22 metric tons per hectare of biochar is proposed to optimize water and fertilizer utilization efficiency, alongside augmenting the soil organic matter content, within maize farming under drip irrigation and mulching practices on sandy loam soil. However, the biochar must be added at 20 t ha−1 in the third year to counterbalance soil carbon losses and improve SOC.

Root-system architecture is vital for improving soybean (Glycine max L.) growth and nutrient uptake. We characterised root-system architecture and shoot traits of 30 soybean genotypes in a semi-hydroponic system 35 days after sowing (DAS) and validated eight genotypes with contrasting root-system architecture in 1.5 m-deep rhizoboxes at the flowering stage. Among them, two genotypes were selected for evaluation through to maturity. Abundant variation (coefficient of variation values ≥ 0.25) was observed in 11 of 13 measured roots and shoot traits during the early growth stage. After late growth stages, strong positive correlations were found between root traits and shoot traits, except for specific root length and diameter. Seed yield and yield traits at final harvest significantly differed between two contrasting soybean genotypes. The large-rooted genotype had a higher harvest index than the small-rooted genotype. Soybean genotypes with larger root systems had a long time to flowering than those with smaller root systems. Genotypes with large-root systems had 106% more leaf area, and 245% more shoot dry weight than those with small systems, presumably due to high canopy photosynthesis to supply the demand for carbon assimilates to roots. Total root length, and root: shoot ratio-traits data collected in the rhizobox study, strongly correlated with the same traits in the semi-hydroponic phenotyping system. We found genetic variation and phenotypic plasticity in other root and shoot traits such as taproot depth, root dry weight, specific root length, and average root diameter among the tested genotypes. Phenology, particularly time to flowering, was associated with root system size. Some root and shoot traits in the semi-hydroponic phenotyping system at the seedling stage produced similar rankings at the later phenological (flowering) stage when grown in the soil-filled rhizoboxes. The soybean genotypes characterised by vastly different root traits could be used for further glasshouse and field studies to improve adaptation to drought and other specific environments.

Integration of genomic technologies with breeding efforts have been used in recent years for chickpea improvement. Modern breeding along with low cost genotyping platforms have potential to further accelerate chickpea improvement efforts. The implementation of novel breeding technologies is expected to contribute substantial improvements in crop productivity. While conventional breeding methods have led to development of more than 200 improved chickpea varieties in the past, still there is ample scope to increase productivity. It is predicted that integration of modern genomic resources with conventional breeding efforts will help in the delivery of climate-resilient chickpea varieties in comparatively less time. Recent advances in genomics tools and technologies have facilitated the generation of large-scale sequencing and genotyping data sets in chickpea. Combined analysis of high-resolution phenotypic and genetic data is paving the way for identifying genes and biological pathways associated with breeding-related traits. Genomics technologies have been used to develop diagnostic markers for use in marker-assisted backcrossing programmes, which have yielded several molecular breeding products in chickpea. We anticipate that a sequence-based holistic breeding approach, including the integration of functional omics, parental selection, forward breeding and genome-wide selection, will bring a paradigm shift in development of superior chickpea varieties. There is a need to integrate the knowledge generated by modern genomics technologies with molecular breeding efforts to bridge the genome-to-phenome gap. Here, we review recent advances that have led to new possibilities for developing and screening breeding populations, and provide strategies for enhancing the selection efficiency and accelerating the rate of genetic gain in chickpea.

The study investigated the effect of organic/biofertilizers in intercropping patterns on seed yield and yield components and essential oil, fatty acid, and phenolic compounds of fennel (Foeniculum vulgare L.) and fenugreek (Trigonella foenum-graecum L.). Experimental treatments included the application of humic acid (HA), biofertilizers (BFS), and the unfertilized control in five planting patterns [1 row fennel + 2 rows fenugreek intercropping (1F:2FG), 2 rows fennel + 2 rows fenugreek intercropping (2F:2FG), 2 rows fennel + 4 rows fenugreek intercropping (2F:4FG), and sole cropping of each species]. Sole cropping with BFS produced the highest seed yields for fennel (2233 kg ha^-1) and fenugreek (1240 kg ha^-1). In contrast, the 2F:2FG intercropping ratio with BFS yielded the maximum fixed oil content for fennel (17.4%) and fenugreek (8.3%). Application of HA and BFS enhanced oil yields by 66% and 75% in fennel and 40% and 57% in fenugreek, respectively. The 2F:2FG intercropping ratio with BFS produced the maximum essential oil constituents [(E)-anethole, estragole, and fenchone] in fennel. In addition, 2F:4FG with BFS and 1F:1FG with HA produced the highest unsaturated fatty acid (oleic and linoleic acids) concentration in both species. The 2F:2FG intercropping ratio with BFS and HA produced the highest chlorogenic acid and quercetin contents, respectively, in fennel. In contrast, the 2F:4FG intercropping ratio with HA produced the highest chlorogenic acid and caffeic acid contents in fenugreek. Intercropping fennel/fenugreek with BFS or HA improved the essential oil content (fennel only), fixed oil quality and quantity, and phenolic compounds and created a more sustainable cultivation system than sole cropping systems for both species under low-input conditions.

In the Mediterranean-type environment of Australia and other parts of the world, end-of- season or terminal drought is the most significant abiotic stress affecting wheat grain yields. This study examined the response of two wheat cultivars with contrasting root system size to terminal drought and the effect of terminal drought on grain yield and yield components. The cultivars were grown in 1.0 m deep PVC columns filled with soil in a glasshouse under well-watered conditions until the onset of ear emergence (Z51) when well-watered and terminal drought treatments were imposed. Terminal drought reduced stomatal conductance, leaf photosynthesis, and transpiration rates faster in Bahatans-87 (larger root system size) than Tincurrin (smaller root system size). Terminal drought reduced grain yield in both cultivars, more so in Bahatans-87 (80%) with the large root system than Tincurrin (67%) with the small root system, which was mainly due to a reduction in grain number and grain size in Bahatans-87 and grain size in Tincurrin. In the terminal drought treatment, Bahatans-87 had 59% lower water use efficiency than Tincurrin, as Bahatans-87 used 39% more water and reduced grain yield more than Tincurrin. The lesser reduction in grain yield in Tincurrin was associated with slower water extraction by the small root system and slower decline in stomatal conductance, leaf photosynthesis, and transpiration rates, but more importantly to faster phenological development, which enabled grain filling to be completed before the severe effects of water stress.

AM symbiosis improved maize salt tolerance by accelerating Na⁺ shoot-to-root translocation rate and mediating Na⁺/K⁺ distribution between shoots and roots.

Soil salinity affects various crop cultivation but legumes are the most sensitive to salinity. Osmotic stress is the first stage of salinity stress caused by excess salts in the soil on plants which adversely affects the growth instantly. The Trehalose-6-phosphate synthase (TPS) genes play a key role in the regulation of abiotic stresses resistance from the high expression of different isoform. Selected genotypes were evaluated to estimate for salt tolerance as well as genetic variability at morphological and molecular level. Allelic variations were identified in some of the selected genotypes for the TPS gene. A comprehensive analysis of the TPS gene from selected genotypes was conducted. Presence of significant genetic variability among the genotypes was found for salinity tolerance. This is the first report of allelic variation of TPS gene from chickpea and results indicates that the SNPs present in these conserved regions may contribute largely to functional distinction. The nucleotide sequence analysis suggests that the TPS gene sequences were found to be conserved among the genotypes. Some selected genotypes were evaluated to estimate for salt tolerance as well as for comparative analysis of physiological, molecular and allelic variability for salt responsive gene Trehalose-6-Phosphate Synthase through sequence similarity. Allelic variations were identified in some selected genotypes for the TPS gene. It is found that Pusa362, Pusa1103, and IG5856 are the most salt-tolerant lines and the results indicates that the identified genotypes can be used as a reliable donor for the chickpea improvement programs for salinity tolerance.

Root system size is a key trait for improving water and nitrogen uptake efficiency in wheat (Triticum aestivum L.). This study aimed (i) to characterize the root system and shoot traits of five wheat cultivars with apparent differences in root system size; (ii) to evaluate whether the apparent differences in root system size observed at early vegetative stages in a previous semi-hydroponic phenotyping experiment are reflected at later phenological stages in plants grown in soil using large rhizoboxes. The five wheat cultivars were grown in a glasshouse in rhizoboxes filled to 1.0 m with field soil. Phenology and shoot traits were measured and root growth and proliferation were mapped to quantify root length density (RLD), root length per plant, root biomass and specific root length (SRL). Wheat cultivars with large root systems had greater root length, more root biomass and thicker roots, particularly in the top 40 cm, than those with small root systems. Cultivars that reached anthesis later had larger root system sizes than those that reached anthesis earlier. Later anthesis allowed more time for root growth and proliferation. Cultivars with large root systems had 25% more leaf area and biomass than those with small root systems, which presumably reflects high canopy photosynthesis to supply the demand for carbon assimilates to roots. Wheat cultivars with contrasting root system sizes at the onset of tillering (Z2.1) in a semi-hydroponic phenotyping system maintained their size ranking at booting (Z4.5) when grown in soil. Phenology, particularly time to anthesis, was associated with root system size.