Publications

Plant growth and development is dependent on a plant’s ability to convert light energy into usable chemical energy during a process termed photosynthesis. However, temperatures above that optimum for growth (heat stress) may injure and/or irreversibly damage photosynthetic machinery, pigments, and metabolites including photosynthetic enzymes, as well as the stomata (Xu et al. 1995; Sairam et al. 2000; Farooq et al. 2011). Heat stress disrupts the integrity of thylakoid membranes, thus inhibiting the activities of membrane-associated electron carriers and enzymes (Rexroth et al. 2011), which reduces the rate of photosynthesis.

Abstract Genetic differences in osmotic adjustment (OA) have been reported among chickpea ( Cicer arietinum ) cultivars. In this study eight advanced breeding lines (ABLs) derived from a cross between CTS 60543 (high OA) and Kaniva (low OA) and Tyson (medium OA) and Kaniva, along with the parents, were evaluated for OA, leaf carbohydrate composition and leaf gas exchange under dryland field conditions in India. The water potential (WP) decreased to lower values (less than −2.5 MPa) in Tyson, M 110 and M 86 than in the other genotypes. With decrease in WP, OA increased by 0.5 MPa in Kaniva and CTS 60543 to 1.3 MPa in M 55. As the decrease in WP varied with genotype, when OA was regressed against WP M 39 and M 55 had greater increases in OA with decrease in WP than the remaining nine genotypes, including the parents. As WP decreased, leaf starch content decreased while total soluble sugars, hexoses and sucrose increased: the decrease in starch was much smaller in M 93 and M 129 than in Tyson and M 51, but genotypic differences could not be detected in the increase in total sugars, hexoses or sucrose. The rates of photosynthesis and transpiration decreased as the WP became more negative, but M 129 reached low rates of photosynthesis (2 μmol m −2 s −1 ) and transpiration at a WP of −1.7 MPa, whereas Tyson reached the same low rate at −2.4 MPa. While OA varied among the chickpea genotypes, the differences were not associated with the changes in carbohydrate composition or the rates of gas exchange at low values of WP. Further, the degree of OA of the 11 genotypes was not the same as when they were selected for differences in OA under rainout shelter conditions in the field in Australia, suggesting that OA may show poor stability depending upon the stress level, location or physiological stage of the plant. This suggests that OA is not a valuable drought‐resistance trait to select for in chickpea breeding programmes.

The frequency and severity of extreme climatic conditions such as drought, salinity, cold, and heat are increasing due to climate change. Moreover, in the field, plants are affected by multiple abiotic stresses simultaneously or sequentially. Thus, it is imperative to compare the effects of stress combinations on crop plants relative to individual stresses. This study investigated the differential regulation of physio-biochemical and metabolomics parameters in peanut (Arachis hypogaea L.) under individual (salt, drought, cold, and heat) and combined stress treatments using multivariate correlation analysis. The results showed that combined heat, salt, and drought stress compounds the stress effect of individual stresses. Combined stresses that included heat had the highest electrolyte leakage and lowest relative water content. Lipid peroxidation and chlorophyll contents did not significantly change under combined stresses. Biochemical parameters, such as free amino acids, polyphenol, starch, and sugars, significantly changed under combined stresses compared to individual stresses. Free amino acids increased under combined stresses that included heat; starch, sugars, and polyphenols increased under combined stresses that included drought; proline concentration increased under combined stresses that included salt. Metabolomics data that were obtained under different individual and combined stresses can be used to identify molecular phenotypes that are involved in the acclimation response of plants under changing abiotic stress conditions. Peanut metabolomics identified 160 metabolites, including amino acids, sugars, sugar alcohols, organic acids, fatty acids, sugar acids, and other organic compounds. Pathway enrichment analysis revealed that abiotic stresses significantly affected amino acid, amino sugar, and sugar metabolism. The stress treatments affected the metabolites that were associated with the tricarboxylic acid (TCA) and urea cycles and associated amino acid biosynthesis pathway intermediates. Principal component analysis (PCA), partial least squares-discriminant analysis (PLS-DA), and heatmap analysis identified potential marker metabolites (pinitol, malic acid, and xylopyranose) that were associated with abiotic stress combinations, which could be used in breeding efforts to develop peanut cultivars that are resilient to climate change. The study will also facilitate researchers to explore different stress indicators to identify resistant cultivars for future crop improvement programs.

Plant productivity is directly affected by the capacity of the root system to forage for soil resources. An enhanced understanding of root-soil interactions provides the potential to improve crop performance in specific soil environments. Interactions between roots and soil are, however, complex. The root-soil environment is heterogeneous and difficult to visualise and measure, root architecture and root growth responses are complex and dynamic, and processes from the ionic and rhizosphere scale right up to the whole crop and even catchment scale are involved. For these reasons, pot experiments are used in root studies to simplify the environment, target specific interactions and aid with visualisation and measurement. Significant challenges exist, however, in relating pot studies to the field, requiring upscaling from a spatially confined and artificially contrived environment to the reality of a more complex cropping environment. Simulation models provide an opportunity to upscale complex root-soil interactions from the pot to the field, but to do so they must represent the way that plant roots explore a restricted pot environment.

Elevated CO2 often increases grain yield in wheat by enhancing grain number per ear, which can result from an increase in the potential number of florets or a reduction in the death of developed florets. The hypotheses that elevated CO2 reduces floret death rather than increases floret development, and that grain size in a genotype with more grains per unit area is limited by the rate of grain filling, were tested in a pair of sister lines contrasting in tillering capacity (restricted- vs. free-tillering). The hypotheses were tested under elevated CO2, combined with +3°C above ambient temperature and terminal drought, using specialized field tunnel houses. Elevated CO2 increased net leaf photosynthetic rates and likely the availability of carbon assimilates, which significantly reduced the rates of floret death and increased the potential number of grains at anthesis in both sister lines by an average of 42%. The restricted-tillering line had faster grain-filling rates than the free-tillering line because the free-tillering line had more grains to fill. Furthermore, grain-filling rates were faster under elevated CO2 and +3°C above ambient. Terminal drought reduced grain yield in both lines by 19%. Elevated CO2 alone increased the potential number of grains, but a trade-off in yield components limited grain yield in the free-tillering line. This emphasizes the need for breeding cultivars with a greater potential number of florets, since this was not affected by the predicted future climate variables.

The Fabaceae species have a major role to play in sustainable farming systems, but they have lagged behind other families in respect to the development of doubled haploid protocols for plant improvement. Currently, no plant improvement program uses doubled haploids on a routine basis for any member of the Fabaceae. There has recently been renewed interest in haploid research as the usefulness of doubled haploid material in molecular mapping has become clear. This review provides a comprehensive account of the current information regarding the development of haploid protocols in the Fabaceae. In the Fabaceae crop species there have been isolated reports of haploid plant induction in the phaseoloid clade; soybean, cowpea and pigeonpea, as well as promising progress towards haploidy in peanut and winged bean. As yet there have been no reports of haploid plant production in the galegoid clade, but early stage haploid embryogenesis has been achieved in chickpea, field pea, and lupin. Success in the production of haploid plants has also been reported within the pasture genera Lotus, Medicago, and Trifolium and the arboreal genera Cassia, Peltophorum, and Albizzia. A review of the literature has enabled us to identify some general similarities between the protocols developed for haploid plant induction across the various legumes. These are the culture of intact anthers; use of a cold pretreatment to induce sporophytic development; targeting of microspores at the uninucleate stage of development; and use of MS (Murashige and Skoog, 1962 Murashige, T. and Skoog, F. 1962. A revised medium for rapid growth and bioassays with tobacco tissue cultures. Physiol. Plant., 15: 473–497. [CSA][Crossref], [Web of Science ®] , [Google Scholar]) based nutrient medium with plant growth regulators to encourage continued division following induction. These protocol commonalities will assist researchers to identify approaches suited to their target Fabaceae species. The paucity of research funding for haploid research in most Fabaceae species has highlighted the need for strong collaborative linkages between institutions and researchers.

The online version contains supplementary material available at 10.1007/s10668-021-01342-y.

Both PU and PC increased maize yield, water use efficiency (WUE), and partial factor productivity from applied N (PFPN), relative to CK. PC increased maize yield more than PU, and had higher soil organic carbon (SOC) content than PU, which was mainly due to the decline in SOC stocks in the 250–2000, 53–250, and <53 μm soil aggregates. The soil bacterial community structure was driven by SOC, C: N ratio, total nitrogen (TN), pH, microaggregates, clay and silt in CK, and by larger macroaggregates and mean weight diameter in PC and PU. Both PC and PU significantly changed soil bacterial community beta diversity, and decreased both positive and negative links of the co-occurrence network, relative to CK. Better soil nutrient conditions in PC explained the small number of positive and negative links between soil bacteria. Our results suggest PM improves maize yield, water and nitrogen use efficiency, and soil aggregate stability while alleviating bacterial competition. However, the reduction of SOC and pH caused by PM still needs our attention. PC alleviates the decline of soil fertility and soil acidification and has higher yield relative to PU. Therefore, we proposed PC is a potential agricultural measure that can replace PU on the Loess Plateau.

The M1 treatment produced significantly higher lucerne forage yields than the M0 treatment during the first five years, but the yield-increasing effect of film mulch gradually diminished over time, with no effect in Years 6-8, and lower yields than the M0 treatment in Year 9. Phosphorus fertilization significantly increased forage yield after Year 3 in the M0 treatment, but only in Years 3-5 in the M1 treatment. In Years 2-5, film mulch significantly increased soil organic carbon, total nitrogen (N), inorganic N, and microbial biomass carbon in P0, P1, and P2 but not in P3. However, in Years 7-9, film mulch significantly decreased soil available potassium (K), organic carbon mineralization, lucerne density, and shoot K concentration, but did not reduce soil N and P availability at any level P of application. Moreover, plastic film mulch significantly increased the soil water content at 0-300 cm deep from Year 7 onwards. In conclusion, film mulch ceased to enhance lucerne production beyond year 6, which could not be attributed to soil water content, N or P availability but was partially associated with reduced soil K availability. Consequently, future research should focus on soil K availability, and K addition should be considered after five years in lucerne pastures mulched with plastic film in semiarid areas.

Agricultural intensification has increased crop productivity but simplified production and reduced cropping system diversity. In recent decades, the intensified wheat–maize rotation in the North China Plain has sharply decreased the groundwater table, with associated environmental and biodiversity issues. Understanding whether increasing cropping system diversity stabilizes productivity, improves resilience, and reduces adverse environmental impacts is critical. This study quantified the water requirements of nine staple crops from 1960 to 2020, established 15 alternative crop rotations, and evaluated the resilience of each rotation in the Cangzhou area, a typical groundwater deletion funnel area. The results showed that reducing cropping density (harvests per year) from 2 to 1.5 decreased the average annual water requirement and irrigation demand by 14 % and 33 %, respectively. Summer soybean alternated with maize and rotated with wheat did not reduce groundwater use but increased profitability and protein production. Spring mung bean–summer millet-based multi-rotations had higher precipitation coupling degrees (8 % in wet years, 17 % in normal years, and 56 % in dry years) and profitability (1.1–2.4 times) than the wheat–maize rotation. The spring potato–summer millet rotation in one year had the greatest profitability, the highest equivalent yield to wheat, and the highest water use efficiency (WUE), while spring maize rotated with winter wheat–summer soybean performed best for protein content, energy output, and WUEs. This study identified 11 alternative rotations with a higher comprehensive evaluation index than the conventional wheat–maize rotation based on entropy-TOPSIS considering 12 indicators. Spring mungbean is not suitable for inclusion in the crop rotation when solely cultivated in one year due to mismatched rainfall. Beyond wheat and maize, soybean, millet, and potato are promising crops for innovative multi-year multi-crop rotations to enhance crop diversification, maximize system outputs, and minimize groundwater and energy depletion. This study’s analysis could be extended to develop robust and diverse crop rotations with multiple co-benefits in other water-stressed agricultural regions.