Trans-omics biomarker model improves prognostic prediction accuracy for early-stage lung adenocarcinoma
Article 2019 en
Authors
XD
Xuesi Dong
RZ
Ruyang Zhang
JH
Jieyu He
Abstract
1 min read
Limited studies have focused on developing prognostic models with trans-omics biomarkers for early-stage lung adenocarcinoma (LUAD).We performed integrative analysis of clinical information, DNA methylation, and gene expression data using 825 early-stage LUAD patients from 5 cohorts.Ranger algorithm was used to screen prognosis-associated biomarkers, which were confirmed with a validation phase.Clinical and biomarker information was fused using an iCluster plus algorithm, which significantly distinguished patients into highand low-mortality risk groups (Pdiscovery = 0.01 and Pvalidation = 2.71×10 -3 ).Further, potential functional DNA methylation-gene expression-overall survival pathways were evaluated by causal mediation analysis.The
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Ruyang Zhang, Linjing Lai, Jieyu He, Chao Chen, Dongfang You, Weiwei Duan, Xuesi Dong, Ying Zhu, Lijuan Lin, Sipeng Shen, Yichen Guo, Li Su, Andrea T. Shafer, Sebastián Morán, Thomas Fleischer, Maria Moksnes Bjaanæs, Anna Karlsson, Maria Planck, Johan Staaf, Åslaug Helland, Manel Esteller, Yongyue Wei, Feng Chen, David C. Christiani
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