octoFLU: Automated Classification for the Evolutionary Origin of Influenza A Virus Gene Sequences Detected in U.S. Swine — Jennifer Chang (2019) | RDL Network
The diversity of the 8 genes of influenza A viruses (IAV) in swine reflects introductions from nonswine hosts and subsequent antigenic drift and shift. Here, we curated a data set and present a pipeline that assigns evolutionary lineage and genetic clade to query gene segments.
Joshua D. Powell, Eugenio J. Abente, Jennifer Chang, Carine K. Souza, Daniela S. Rajão, Tavis K. Anderson, Michael Zeller, Phillip C. Gauger, Nicola S. Lewis, Amy L. Vincent
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