Publications

During soil waterlogging, plants experience O₂ deficits, elevated ethylene, and high CO₂ in the root-zone. The effects on chickpea (Cicer arietinum L.) and faba bean (Vicia faba L.) of ethylene (2 μL L^-1 ), CO₂ (2-20% v/v) or deoxygenated stagnant solution were evaluated. Ethylene and high CO₂ reduced root growth of both species, but O₂ deficiency had the most damaging effect and especially so for chickpea. Chickpea suffered root tip death when in deoxygenated stagnant solution. High CO₂ inhibited root respiration and reduced growth, whereas sugars accumulated in root tips, of both species. Gas-filled porosity of the basal portion of the primary root of faba bean (23%, v/v) was greater than for chickpea (10%), and internal O₂ movement was more prominent in faba bean when in an O₂ -free medium. Ethylene treatment increased the porosity of roots. The damaging effects of low O₂ , such as death of root tips, resulted in poor recovery of root growth upon reaeration. In conclusion, ethylene and high CO₂ partially inhibited root extension in both species, but low O₂ in deoxygenated stagnant solution had the most damaging effect, even causing death of root tips in chickpea, which was more sensitive to the low O₂ condition than faba bean.

Both PU and PC increased maize yield, water use efficiency (WUE), and partial factor productivity from applied N (PFPN), relative to CK. PC increased maize yield more than PU, and had higher soil organic carbon (SOC) content than PU, which was mainly due to the decline in SOC stocks in the 250–2000, 53–250, and <53 μm soil aggregates. The soil bacterial community structure was driven by SOC, C: N ratio, total nitrogen (TN), pH, microaggregates, clay and silt in CK, and by larger macroaggregates and mean weight diameter in PC and PU. Both PC and PU significantly changed soil bacterial community beta diversity, and decreased both positive and negative links of the co-occurrence network, relative to CK. Better soil nutrient conditions in PC explained the small number of positive and negative links between soil bacteria. Our results suggest PM improves maize yield, water and nitrogen use efficiency, and soil aggregate stability while alleviating bacterial competition. However, the reduction of SOC and pH caused by PM still needs our attention. PC alleviates the decline of soil fertility and soil acidification and has higher yield relative to PU. Therefore, we proposed PC is a potential agricultural measure that can replace PU on the Loess Plateau.

Antimony (Sb) is introduced into soils, sediments, and aquatic environments from various sources such as weathering of sulfide ores, leaching of mining wastes, and anthropogenic activities. High Sb concentrations are toxic to ecosystems and potentially to public health via the accumulation in food chain. Although Sb is poisonous and carcinogenic to humans, the exact mechanisms causing toxicity still remain unclear. Most studies concerning the remediation of soils and aquatic environments contaminated with Sb have evaluated various amendments that reduce Sb bioavailability and toxicity. However, there is no comprehensive review on the biogeochemistry and transformation of Sb related to its remediation. Therefore, the present review summarizes: (1) the sources of Sb and its geochemical distribution and speciation in soils and aquatic environments, (2) the biogeochemical processes that govern Sb mobilization, bioavailability, toxicity in soils and aquatic environments, and possible threats to human and ecosystem health, and (3) the approaches used to remediate Sb-contaminated soils and water and mitigate potential environmental and health risks. Knowledge gaps and future research needs also are discussed. The review presents up-to-date knowledge about the fate of Sb in soils and aquatic environments and contributes to an important insight into the environmental hazards of Sb. The findings from the review should help to develop innovative and appropriate technologies for controlling Sb bioavailability and toxicity and sustainably managing Sb-polluted soils and water, subsequently minimizing its environmental and human health risks.

Understanding the intricate molecular mechanisms of stress-responsive lncRNAs is in its infancy. The availability of a comprehensive atlas of lncRNAs across whole genomes in crop plants, coupled with a comprehensive understanding of the complex molecular mechanisms that regulate various abiotic stress responses, will enable us to use lncRNAs as potential biomarkers for tailoring abiotic stress-tolerant plants in the future.

Biochar production and application have become increasingly popular in the past 15 years. Biochar, derived from diverse biomass types, offers a rich carbon source created through thermal combustion. Biochar production primarily depends on pyrolysis conditions and feedstock type. This review focuses on the multifaceted aspects of biochar, encompassing hydrothermal carbonization, gasification, and pyrolysis temperatures in biochar production and its role in bioeconomy and soil remediation. Biochar has yielded valuable insights, notably in decreasing nutrient leaching, curbing greenhouse gas (GHG) emissions, reducing the bioavailability of environmental pollutants, sequestering carbon (C) in soils, and enhancing agricultural productivity. Consequently, it has emerged as a valuable commodity for the bioeconomy, which involves harnessing bioresources through bioengineering to create economically valuable products. As a marketable output, biochar finds application in energy, diverse biochar-based product manufacturing, and the agricultural sector. Thus, biochar production not only enhances soil quality but also unlocks additional revenue streams. This review underscores the critical role of feedstock selection and pyrolysis conditions in optimizing biochar production. Furthermore, it highlights biochar as a sustainable and effective tool for improving various soil types and remediating soil contamination caused by organic impurities, including persistent organic compounds and antibiotics.

Global crop productivity faces a significant threat from climate change-induced drought stress (DS), which is vital for sustainable agriculture and global food security. Uncovering DS adaptation and tolerance mechanisms in crops is necessary to alleviate climate challenges. Innovative plant breeding demands revolutionary approaches to develop stress-smart plants. Metabolomics, a promising field in plant breeding, offers a predictive tool to identify metabolic markers associated with plant performance under DS, enabling accelerated crop improvement. Central to DS adaptation is metabolomics-driven metabolic regulation, which is critical for maintaining cell osmotic potential in crops. Recent innovations allow rapid mapping of specific metabolites to their genetic pathways, providing a valuable resource for plant scientists. Metabolomics-driven molecular breeding, integrating techniques such as mQTL and mGWAS, enhances our ability to discover key genetic elements linked to stress-responsive metabolites. This integration offers a beneficial platform for plant scientists, yielding significant insights into the complex metabolic networks underlying DS tolerance. Therefore, this review discusses (1) insights into metabolic regulation for DS adaptation, (2) the multifaceted role of metabolites in DS tolerance and nutritional/yield trait improvement, (3) the potential of single-cell metabolomics and imaging, (4) metabolomics-driven molecular breeding, and (5) the application of metabolic and genetic engineering for DS-tolerant crops. We finally propose that the metabolomics-driven approach positions drought-smart crops as key contributors to future food production, supporting the vital goal of achieving “zero hunger”.