1,987 publications from this institution
This paper presents an extension of the Dynamic Causal Modelling (DCM) framework to the analysis of phase-coupled data. A weakly coupled oscillator approach is used to describe dynamic phase changes in a network of oscillators. The use of Bayesian model comparison allows one to infer the mechanisms underlying synchronization processes in the brain. For example, whether activity is driven by master-slave versus mutual entrainment mechanisms. Results are presented on synthetic data from physiological models and on MEG data from a study of visual working memory.
<p><strong>We formalize the resilience of the Earth system under the free energy principle (Friston 2013; Parr et al, 2019; Rubin et al, 2020). This allows us to understand resilience as the self-maintenance of a non-equilibrium steady-state. This autopoietic steady-state depends on gradient flows that counter entropic dissipation by random fluctuations. These flows can also be interpreted in a statistical sense, which amounts to the claim that resilience depends upon the Earth system possessing a Markov blanket were blanket states (i.e., active and sensory states) separate internal states from external states. Our formalization rests on how the metabolic rates of the biosphere (i.e., internal states) relate vicariously to solar radiation at the Earth’s surface (i.e., external states), through the changes in greenhouse and albedo effects (i.e. active states) and ocean-driven global temperature changes (i.e. sensory states). Describing the interaction between the metabolic rates and solar radiation as climatic states—via a Markov blanket—amounts to describing the dynamics of the internal states as actively inferring external states. This underwrites climatic non-equilibrium steady-state through variational free energy minimization—and thus a form of Earth resilience, through active inference at the planetary scale.</strong></p><p><strong>References</strong></p><p>Friston, K., 2013. Life as we know it. Journal of the Royal Society Interface, 10(86), p.20130475.</p><p>Parr, T., Da Costa, L. and Friston, K., 2019. Markov blankets, information geometry and stochastic thermodynamics. <em>Philosophical Transactions of the Royal Society A</em>, <em>378</em>(2164), p.20190159.</p><p>Rubin, S., Parr, T., Da Costa, L. and Friston, K., 2020. Future climates: Markov blankets and active inference in the biosphere. <em>Journal of the Royal Society Interface</em>, 17(172), p.20200503.</p>
Adversarial collaboration has been championed as the gold standard for resolving scientific disputes. Although the virtues of adversarial collaboration have been extensively discussed, the approach has gained little traction in neuroscience and allied fields. In this Perspective, we argue that adversarial collaborative research has been stymied by an overly-restrictive concern with the falsification of scientific theories. We advocate instead for a more expansive view that frames adversarial collaboration in terms of Bayesian belief updating, model comparison, and evidence accumulation. This framework broadens the scope of adversarial collaboration to accommodate a wide range of informative (but not necessarily definitive) studies, while affording the requisite formal tools to guide experimental design and data analysis in the adversarial setting. We provide worked examples that demonstrate how these tools can be deployed to score theoretical models in terms of a common metric of evidence, thereby furnishing a means of tracking the amount of empirical support garnered by competing theories over time.
Living systems face both environmental complexity and limited access to free-energy resources. Survival under these conditions requires a control system that can activate, or deploy, available perception and action resources in a context specific way. In Part I, we introduced the free-energy principle (FEP) and the idea of active inference as Bayesian prediction-error minimization, and show how the control problem arises in active inference systems. We then review classical and quantum formulations of the FEP, with the former being the classical limit of the latter. In this accompanying Part II, we show that when systems are described as executing active inference driven by the FEP, their control flow systems can always be represented as tensor networks (TNs). We show how TNs as control systems can be implemented within the general framework of quantum topological neural networks, and discuss the implications of these results for modeling biological systems at multiple scales.
What we see is fundamentally dependent on where we look. Despite this seemingly obvious statement, many accounts of the neurobiology underpinning visual perception fail to consider the active nature of how we sample our sensory world. This review offers an overview of the neurobiology of visual perception, which begins with the control of saccadic eye movements. Starting from here, we can follow the anatomy backwards, to try to understand the functional architecture of neuronal networks that support the interrogation of a visual scene. Many of the principles encountered in this exercise are equally applicable to other perceptual modalities. For example, the somatosensory system, like the visual system, requires the sampling of data through mobile receptive epithelia. Analysis of a somatosensory scene depends on what is palpated, in much the same way that visual analysis relies on what is foveated. The discussion here is structured around the anatomical systems involved in active vision and visual scene construction, but will use these systems to introduce some general theoretical considerations. We will additionally highlight points of contact between the biology and the pathophysiology that has been proposed to cause a clinical disorder of scene construction – spatial hemineglect.
This dataset includes skin conductance response (SCR) measurements, keypress responses and keypress response times to acoustic and visual stimuli for each of 22 healthy unmedicated participants (11 males and 11 females aged 22+/-4.8 years. The auditory stimuli are 1s long white noise bursts at 95dB presented over headphones. Visual stimuli are aversive pictures drawn from the International Affective Picture System. ITI are selected randomly on each trial from 29s, 34s or 39s.
Abstract It has been suggested that the brain controls hand movements via internal models that rely on visual and proprioceptive cues about the state of the hand. In active inference formulations of such models, the relative influence of each modality on action and perception is determined by how precise (reliable) it is expected to be. The ‘top-down’ affordance of expected precision to a particular sensory modality is associated with attention. Here, we asked whether increasing attention to (i.e., the precision of) vision or proprioception would enhance performance in a hand-target phase matching task, in which visual and proprioceptive cues about hand posture were incongruent. We show that in a simple simulated agent—based on predictive coding formulations of active inference—increasing the expected precision of vision or proprioception improved task performance (target matching with the seen or felt hand, respectively) under visuo-proprioceptive conflict. Moreover, we show that this formulation captured the behaviour and self-reported attentional allocation of human participants performing the same task in a virtual reality environment. Together, our results show that selective attention can balance the impact of (conflicting) visual and proprioceptive cues on action—rendering attention a key mechanism for a flexible body representation for action.
Abstract Humans generate intricate whole-body motions by planning, executing and combining individual limb movements. We investigated this fundamental aspect of motor control and approached the problem of autonomous task completion by hierarchical generative modelling with multi-level planning, emulating the deep temporal architecture of human motor control. We explored the temporal depth of nested timescales, where successive levels of a forward or generative model unfold, for example, object delivery requires both global planning and local coordination of limb movements. This separation of temporal scales suggests the advantage of hierarchically organizing the global planning and local control of individual limbs. We validated our proposed formulation extensively through physics simulation. Using a hierarchical generative model, we showcase that an embodied artificial intelligence system, a humanoid robot, can autonomously complete a complex task requiring a holistic use of locomotion, manipulation and grasping: the robot adeptly retrieves and transports a box, opens and walks through a door, kicks a football and exhibits robust performance even in the presence of body damage and ground irregularities. Our findings demonstrated the efficacy and feasibility of human-inspired motor control for an embodied artificial intelligence robot, highlighting the viability of the formulized hierarchical architecture for achieving autonomous completion of challenging goal-directed tasks.
We review a recent shift in conceptions of interoception and its relationship to hierarchical inference in the brain. The notion of interoceptive inference means that bodily states are regulated by autonomic reflexes that are enslaved by descending predictions from deep generative models of our internal and external milieu. This re-conceptualization illuminates several issues in cognitive and clinical neuroscience with implications for experiences of selfhood and emotion. We first contextualize interoception in terms of active (Bayesian) inference in the brain, highlighting its enactivist (embodied) aspects. We then consider the key role of uncertainty or precision and how this might translate into neuromodulation. We next examine the implications for understanding the functional anatomy of the emotional brain, surveying recent observations on agranular cortex. Finally, we turn to theoretical issues, namely, the role of interoception in shaping a sense of embodied self and feelings. We will draw links between physiological homoeostasis and allostasis, early cybernetic ideas of predictive control and hierarchical generative models in predictive processing. The explanatory scope of interoceptive inference ranges from explanations for autism and depression, through to consciousness. We offer a brief survey of these exciting developments. This article is part of the themed issue ‘Interoception beyond homeostasis: affect, cognition and mental health’.