Publications

Provides detailed methods and results for data collection and analyses.

Abstract This paper presents the development and evaluation of ElderWander, a digital platform designed to provide accessible tourist information for older adults in Portugal. Addressing the lack of digital tourism platforms that cater to the physical accessibility needs of older adults users, ElderWander aggregates information about various points of interest, enabling older adults to find locations that meet their specific needs. The platform was developed focused on localization and using a question-answer model to simplify tour planning. Extensive testing, including accessibility and usability validations, pre-surveys, and post-interviews, yielded positive results, indicating the platform’s effectiveness and achieving high accessibility and usability scores. The findings highlight ElderWander’s potential as a model for future advancements in accessible tourism technology, promoting active ageing and enhancing the tour planning experience for older adults.

Abstract Over this century, coral reefs will run the gauntlet of climate change, as marine heatwaves (MHWs) become more intense and frequent, and ocean acidification (OA) progresses. However, we still lack a quantitative assessment of how, and to what degree, OA will moderate the responses of corals to MHWs as they intensify throughout this century. Here, we first projected future MHW intensities for tropical regions under three future greenhouse gas emissions scenario (representative concentration pathways, RCP2.6, RCP4.5 and RCP8.5) for the near‐term (2021–2040), mid‐century (2041–2060) and late‐century (2081–2100). We then combined these MHW intensity projections with a global data set of 1,788 experiments to assess coral attribute performance and survival under the three emissions scenarios for the near‐term, mid‐century and late‐century in the presence and absence of OA. Although warming and OA had predominately additive impacts on the coral responses, the contribution of OA in affecting most coral attributes was minor relative to the dominant role of intensifying MHWs. However, the addition of OA led to greater decreases in photosynthesis and survival under intermediate and unrestricted emissions scenario for the mid‐ and late‐century than if intensifying MHWs were considered as the only driver. These results show that role of OA in modulating coral responses to intensifying MHWs depended on the focal coral attribute and extremity of the scenario examined. Specifically, intensifying MHWs and OA will cause increasing instances of coral bleaching and substantial declines in coral productivity, calcification and survival within the next two decades under the low and intermediate emissions scenario. These projections suggest that corals must rapidly adapt or acclimatize to projected ocean conditions to persist, which is far more likely under a low emissions scenario and with increasing efforts to manage reefs to enhance resilience.

Abstract The Ocean microbiome has a crucial role in Earth’s biogeochemical cycles. During the last decade, global cruises such as Tara Oceans and the Malaspina Expedition have expanded our understanding of the diversity and genetic repertoire of marine microbes. Nevertheless, there are still knowledge gaps regarding their diversity patterns throughout depth gradients ranging from the surface to the deep ocean. Here we present a dataset of 76 microbial metagenomes (MProfile) of the picoplankton size fraction (0.2–3.0 µm) collected in 11 vertical profiles covering contrasting ocean regions sampled during the Malaspina Expedition circumnavigation (7 depths, from surface to 4,000 m deep). The MProfile dataset produced 1.66 Tbp of raw DNA sequences from which we derived: 17.4 million genes clustered at 95% sequence similarity (M-GeneDB-VP), 2,672 metagenome-assembled genomes (MAGs) of Archaea and Bacteria (Malaspina-VP-MAGs), and over 100,000 viral genomic sequences. This dataset will be a valuable resource for exploring the functional and taxonomic connectivity between the photic and bathypelagic tropical and sub-tropical ocean, while increasing our general knowledge of the Ocean microbiome.

Short-term hypoxia that lasts just a few days or even hours is a major threat for the marine ecosystems. The single effect of the human-induced levels of hypoxia and other anthropogenic impacts such as elevated pCO2 can reduce the ability of preys to detect their predators across taxa. Moreover, both processes, hypoxia and elevated pCO2, are expected to co-occur in certain habitats, but the synergic consequences of both processes and the ability of fish to recover remain unknown. To provide empirical evidence to this synergy, we experimentally evaluated the risk-taking behavior in juveniles of the European seabass (Dicentrachus labrax), an important commercial fisheries species after recovering from short-term hypoxia and different pH scenarios. The behavior of seabass juveniles was monitored in an experimental arena before and after the exposure to a simulated predator and contrasted to control fish (BACI design) (current levels of hypoxia and elevated pCO2) using a mechanistic function-valued modeling trait approach. Results revealed that fish recovering from elevated pCO2, alone or combined with hypoxia, presented less avoidance behavior in failing to seek refuge when a simulated predator was present in the arena compared to those exposed to control pCO2 levels. Our results show that recovery from short-term exposure to acidification and hypoxia was not synergistic and suggest that recovery from acidification takes longer than from short-term hypoxia treatment through a potential effect on the sensorial and hence behavioral capacities of fish.

Abstract The use of animal‐attached data loggers to quantify animal movement has increased in popularity and application in recent years. High‐resolution tri‐axial acceleration and magnetometry measurements have been fundamental in elucidating fine‐scale animal movements, providing information on posture, traveling speed, energy expenditure, and associated behavioral patterns. Heading is a key variable obtained from the tandem use of magnetometers and accelerometers, although few field investigations have explored fine‐scale changes in heading to elucidate differences in animal activity (beyond the notable exceptions of dead‐reckoning). This paper provides an overview of the value and use of animal heading and a prime derivative, angular velocity about the yaw axis, as an important element for assessing activity extent with potential to allude to behaviors, using “free‐ranging” Loggerhead turtles ( Caretta caretta ) as a model species. We also demonstrate the value of yaw rotation for assessing activity extent, which varies over the time scales considered and show that various scales of body rotation, particularly rate of change of yaw, can help resolve differences between fine‐scale behavior‐specific movements. For example, oscillating yaw movements about a central point of the body's arc implies bouts of foraging, while unusual circling behavior, indicative of conspecific interactions, could be identified from complete revolutions of the longitudinal axis. We believe this approach should help identification of behaviors and “space‐state” approaches to enhance our interpretation of behavior‐based movements, particularly in scenarios where acceleration metrics have limited value, such as for slow‐moving animals.

Abstract The term Blue Carbon (BC) was first coined a decade ago to describe the disproportionately large contribution of coastal vegetated ecosystems to global carbon sequestration. The role of BC in climate change mitigation and adaptation has now reached international prominence. To help prioritise future research, we assembled leading experts in the field to agree upon the top-ten pending questions in BC science. Understanding how climate change affects carbon accumulation in mature BC ecosystems and during their restoration was a high priority. Controversial questions included the role of carbonate and macroalgae in BC cycling, and the degree to which greenhouse gases are released following disturbance of BC ecosystems. Scientists seek improved precision of the extent of BC ecosystems; techniques to determine BC provenance; understanding of the factors that influence sequestration in BC ecosystems, with the corresponding value of BC; and the management actions that are effective in enhancing this value. Overall this overview provides a comprehensive road map for the coming decades on future research in BC science.

Successful prevention and mitigation of biological invasions requires retracing the initial steps of introduction, as well as understanding key elements enhancing the adaptability of invasive species. We studied the genetic diversity of the green alga Caulerpa taxifolia and its associated bacterial communities in several areas around the world. The striking congruence of α and β diversity of the algal genome and endophytic communities reveals a tight association, supporting the holobiont concept as best describing the unit of spreading and invasion. Both genomic compartments support the hypotheses of a unique accidental introduction in the Mediterranean and of multiple invasion events in southern Australia. In addition to helping with tracing the origin of invasion, bacterial communities exhibit metabolic functions that can potentially enhance adaptability and competitiveness of the consortium they form with their host. We thus hypothesize that low genetic diversities of both host and symbiont communities may contribute to the recent regression in the Mediterranean, in contrast with the persistence of highly diverse assemblages in southern Australia. This study supports the importance of scaling up from the host to the holobiont for a comprehensive understanding of invasions.

Understanding the response of ecological networks to perturbations and disruptive events is needed to anticipate the biodiversity loss and extinction cascades. Here, we study how network plasticity reshapes the topology of mutualistic networks in response to species loss. We analyze more than one hundred empirical mutualistic networks and considered random and targeted removal as mechanisms of species extinction. Network plasticity is modeled as either random rewiring, as the most parsimonious approach, or resource affinity-driven rewiring, as a proxy for encoding the phylogenetic similarity and functional redundancy among species. This redundancy should be positively correlated with the robustness of an ecosystem, as functions can be taken by other species once one of them is extinct. We show that effective modularity, i.e. the ability of an ecosystem to adapt or restructure, increases with increasing numbers of extinctions, and with decreasing the replacement probability. Importantly, modularity is mostly affected by the extinction rather than by rewiring mechanisms. These changes in community structure are reflected in the robustness and stability due to their positive correlation with modularity. Resource affinity-driven rewiring offers an increase of modularity, robustness, and stability which could be an evolutionary favored mechanism to prevent a cascade of co-extinctions.

Abstract Among marine organisms, gelatinous zooplankton (GZ; cnidarians, ctenophores, and pelagic tunicates) are unique in their energetic efficiency, as the gelatinous body plan allows them to process and assimilate high proportions of oceanic carbon. Upon death, their body shape facilitates rapid sinking through the water column, resulting in carcass depositions on the seafloor (“jelly‐falls”). GZ are thought to be important components of the biological pump, but their overall contribution to global carbon fluxes remains unknown. Using a data‐driven, three‐dimensional, carbon cycle model resolved to a 1° global grid, with a Monte Carlo uncertainty analysis, we estimate that GZ consumed 7.9–13 Pg C y −1 in phytoplankton and zooplankton, resulting in a net production of 3.9–5.8 Pg C y −1 in the upper ocean (top 200 m), with the largest fluxes from pelagic tunicates. Non‐predation mortality (carcasses) comprised 25% of GZ production, and combined with the much greater fecal matter flux, total GZ particulate organic carbon (POC) export at 100 m was 1.6–5.2 Pg C y −1 , equivalent to 32–40% of the global POC export. The fast sinking GZ export resulted in a high transfer efficiency (T eff ) of 38–62% to 1,000 m and 25–40% to the seafloor. Finally, jelly‐falls at depths >50 m are likely unaccounted for in current POC flux estimates and could increase benthic POC flux by 8–35%. The significant magnitude of and distinct sinking properties of GZ fluxes support a critical yet underrecognized role of GZ carcasses and fecal matter to the biological pump and air‐sea carbon balance.